STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD55Ankyrin repeat domain 55. (613 aa)    
Predicted Functional Partners:
LRATD1
LRAT domain containing 1.
      
 0.823
BRS3
Bombesin receptor subtype 3; Belongs to the G-protein coupled receptor 1 family.
    
 0.783
VSTM5
V-set and transmembrane domain containing 5.
      
 0.703
RD3
Retinal degeneration 3, GUCY2D regulator.
      
 0.676
CLHC1
Clathrin heavy chain linker domain-containing protein 1.
    
 0.664
IFT46
Intraflagellar transport 46.
    
 0.651
IFT52
Intraflagellar transport 52.
    
 0.645
LOC100072189
Uncharacterized protein.
      
 0.634
GREB1
Growth regulating estrogen receptor binding 1.
      
 0.589
IFT74
Intraflagellar transport 74.
    
 
 0.580
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.