STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM45Tripartite motif containing 45. (701 aa)    
Predicted Functional Partners:
RPL35
Ribosomal protein L35.
   
 
 0.730
TRIM35
Tripartite motif containing 35.
     
 0.720
TRIM65
Tripartite motif containing 65.
     
 0.689
EXOSC2
Exosome component 2.
      
 0.673
MAPK8IP3
Mitogen-activated protein kinase 8 interacting protein 3.
    
 
 0.660
TRIM55
Tripartite motif containing 55.
     
 0.647
PARVG
Parvin gamma.
   
 
 0.644
POMT2
Protein O-mannosyltransferase 2.
      
 0.642
F6ZF09_HORSE
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.522
RPS12
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 
 0.522
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.