STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELAVL4ELAV-like protein; Belongs to the RRM elav family. (402 aa)    
Predicted Functional Partners:
HNRNPUL2
Uncharacterized protein.
   
 
 0.701
TMEM120A-2
Serine/threonine/tyrosine interacting like 1.
      
 0.691
RBFOX1
RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events.
  
 
 0.661
LANCL1
LanC like 1.
      
 0.651
LHFPL4
LHFPL tetraspan subfamily member 4.
   
  
 0.645
RTRAF
RNA transcription, translation and transport factor.
   
  
 0.639
FAM98A
Family with sequence similarity 98 member A.
      
 0.617
HNRNPD
Heterogeneous nuclear ribonucleoprotein D like.
  
0.613
FAM98B
Family with sequence similarity 98 member B.
   
  
 0.595
SCG3
Secretogranin III.
   
  
 0.591
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.