STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF11ATNF receptor superfamily member 11a. (647 aa)    
Predicted Functional Partners:
TNFSF11
Tumor necrosis factor ligand superfamily member.
   
 0.998
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.979
TRAF2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.967
RELCH
RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing.
 
    
 0.870
ZCCHC2
Zinc finger CCHC-type containing 2.
      
 0.673
TRAF5
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.660
TRAF1
TNF receptor-associated factor.
    
 0.639
TNFSF14
Tumor necrosis factor ligand 1D.
     
 0.628
TRAF3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.626
TCIRG1
V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.
      
 0.594
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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