STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMBOX1Homeobox containing 1. (443 aa)    
Predicted Functional Partners:
FAM160B2
Family with sequence similarity 160 member B2.
   
  
 0.491
ZNF484
Zinc finger protein 484.
   
 
 0.485
JMY
Junction mediating and regulatory protein, p53 cofactor.
   
  
 0.479
LRRC2
Leucine rich repeat containing 2.
      
 0.472
CITED4
Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4.
      
 0.472
PHTF2
Putative homeodomain transcription factor 2.
      
 0.470
NR2E1
Nuclear receptor subfamily 2 group E member 1.
      
 0.465
ZBTB26
Zinc finger and BTB domain containing 26.
    
 
 0.463
ZNF41
Zinc finger protein 41.
    
 
 0.463
DMTF1
Cyclin D binding myb like transcription factor 1.
   
  
 0.433
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.