STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HLA-DMAMajor histocompatibility complex, class II, DM alpha; Belongs to the MHC class II family. (314 aa)    
Predicted Functional Partners:
LOC100060996
MHC class II antigen.
 
 
 0.999
DQA-2
Ig-like domain-containing protein; Belongs to the MHC class II family.
  
0.990
HLA-DOA
Major histocompatibility complex, class II, DO alpha; Belongs to the MHC class II family.
  
0.977
HLA-DOB
MHC class II histocompatibility antigen, DO beta chain.
   
 0.975
DRB-3
MHC class II antigen.
   
 0.944
DRB
Ig-like domain-containing protein.
   
 0.920
CD4
CD4 molecule.
   
 
 0.915
DRB-2
Ig-like domain-containing protein.
   
 0.908
ENSECAP00000026008
Ig-like domain-containing protein.
     
  0.900
CD74
CD74 molecule.
   
 0.895
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.