STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYTL2Synaptotagmin like 2. (2203 aa)    
Predicted Functional Partners:
RAB44
RAB44, member RAS oncogene family.
    
 
 0.818
RAB27A
RAB27A, member RAS oncogene family.
   
 
 0.794
RAB27B
RAB27B, member RAS oncogene family.
   
 
 0.670
PHACTR3
Phosphatase and actin regulator.
   
 
 0.639
LHFPL2
LHFPL tetraspan subfamily member 2.
   
 
 0.631
FAM111B
Family with sequence similarity 111 member B.
      
 0.620
XIRP1
Uncharacterized protein.
    
 
 0.603
ITSN2
Intersectin 2.
     
 0.596
DNAH6
Dynein axonemal heavy chain 6.
   
  
 0.590
RNF182
Ring finger protein 182.
    
 0.582
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.