STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFR3BEFR3 homolog B. (836 aa)    
Predicted Functional Partners:
TTC7A
Tetratricopeptide repeat domain 7A.
   
 
 0.969
TTC7B
Tetratricopeptide repeat domain 7B.
   
 
 0.914
PI4KA
Phosphatidylinositol 4-kinase alpha; Belongs to the PI3/PI4-kinase family.
   
 
 0.909
FAM126A
Family with sequence similarity 126 member A.
      
 0.846
PIP5K1A
PIPK domain-containing protein.
   
 
 0.752
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
  
 0.694
RHEX
Regulator of hemoglobinization and erythroid cell expansion.
      
 0.576
NUGGC
Nuclear GTPase, germinal center associated.
      
 0.575
CPNE3
Copine 3.
   
  
 0.501
PI4K2B
Phosphatidylinositol 4-kinase type 2 beta.
   
 
 0.496
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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