STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CARS2Cysteinyl-tRNA synthetase 2, mitochondrial. (597 aa)    
Predicted Functional Partners:
LOC100057612
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.922
CARS1
Cysteinyl-tRNA synthetase.
  
  
0.908
LOC100146156
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.903
PIGL
Phosphatidylinositol glycan anchor biosynthesis class L.
  
 
 0.875
EEF1G
Elongation factor 1-gamma; Probably plays a role in anchoring the complex to other cellular components.
   
 0.870
YARS1
Tyrosine--tRNA ligase.
  
 
 0.788
EPRS1
Glutamyl-prolyl-tRNA synthetase.
  
  
 0.723
LOC100072297
Uncharacterized protein.
      
 0.711
LOC100072307
Uncharacterized protein.
      
 0.711
LOC100147438
Uncharacterized protein.
      
 0.711
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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