STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABGAP1LRAB GTPase activating protein 1 like. (1051 aa)    
Predicted Functional Partners:
ALS2CL
ALS2 C-terminal like.
   
  
 0.767
SYT11
Synaptotagmin 11.
      
 0.710
RSBN1L
Round spermatid basic protein 1 like.
      
 0.681
RAB11FIP5
RAB11 family interacting protein 5.
      
 0.649
RAB6A
RAB6A, member RAS oncogene family.
    
 0.642
RAB6B
Uncharacterized protein.
    
 0.642
RAB22A
RAB22A, member RAS oncogene family.
    
 0.634
PPME1
Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated.
      
 0.631
PTPN12
Protein tyrosine phosphatase non-receptor type 12.
      
 0.597
RABGEF1
RAB guanine nucleotide exchange factor 1.
   
  0.582
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.