STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF488Zinc finger protein 488. (234 aa)    
Predicted Functional Partners:
F6W7F8_HORSE
Uncharacterized protein.
   
 
  0.520
COPS7B
COP9 signalosome subunit 7B.
   
 
 0.489
NALCN
Sodium leak channel, non-selective.
     
 0.477
TMEM108
Transmembrane protein 108.
   
  
 0.474
PLCH1
Phosphoinositide phospholipase C.
    
 
 0.473
WDR64
WD repeat domain 64.
    
 
 0.472
PLCXD3
Phosphatidylinositol specific phospholipase C X domain containing 3.
      
 0.470
VPS45
Vacuolar protein sorting 45 homolog; Belongs to the STXBP/unc-18/SEC1 family.
      
 0.470
TBC1D16
TBC1 domain family member 16.
      
 0.469
ENSECAP00000043237
Uncharacterized protein.
   
    0.424
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.