PTMS protein (Equus caballus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PTMS

Uncharacterized protein. (102 aa)

Predicted Functional Partners:

PPP1R2

0.741

EIF1B

0.739

ZNF316

0.710

ZNF865

0.710

ROMO1

0.563

POLR2L-2

0.514

POLR2L

0.514

EDIL3

0.476

ZNF853

0.470

AGA

0.470

Your Current Organism:

Equus caballus

NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGA	EDIL3	ENSECAP00000049131	ENSECAP00000013202	Aspartylglucosaminidase.	EGF like repeats and discoidin domains 3.	0.485
AGA	PTMS	ENSECAP00000049131	ENSECAP00000052954	Aspartylglucosaminidase.	Uncharacterized protein.	0.470
EDIL3	AGA	ENSECAP00000013202	ENSECAP00000049131	EGF like repeats and discoidin domains 3.	Aspartylglucosaminidase.	0.485
EDIL3	PTMS	ENSECAP00000013202	ENSECAP00000052954	EGF like repeats and discoidin domains 3.	Uncharacterized protein.	0.476
EIF1B	POLR2L	ENSECAP00000004015	ENSECAP00000045199	Eukaryotic translation initiation factor 1B.	RNA polymerase II subunit L.	0.722
EIF1B	POLR2L-2	ENSECAP00000004015	ENSECAP00000000800	Eukaryotic translation initiation factor 1B.	RNA polymerase II subunit L.	0.722
EIF1B	PPP1R2	ENSECAP00000004015	ENSECAP00000015718	Eukaryotic translation initiation factor 1B.	Uncharacterized protein.	0.523
EIF1B	PTMS	ENSECAP00000004015	ENSECAP00000052954	Eukaryotic translation initiation factor 1B.	Uncharacterized protein.	0.739
EIF1B	ROMO1	ENSECAP00000004015	ENSECAP00000010117	Eukaryotic translation initiation factor 1B.	Reactive oxygen species modulator 1.	0.692
POLR2L	EIF1B	ENSECAP00000045199	ENSECAP00000004015	RNA polymerase II subunit L.	Eukaryotic translation initiation factor 1B.	0.722
POLR2L	POLR2L-2	ENSECAP00000045199	ENSECAP00000000800	RNA polymerase II subunit L.	RNA polymerase II subunit L.	0.902
POLR2L	PPP1R2	ENSECAP00000045199	ENSECAP00000015718	RNA polymerase II subunit L.	Uncharacterized protein.	0.636
POLR2L	PTMS	ENSECAP00000045199	ENSECAP00000052954	RNA polymerase II subunit L.	Uncharacterized protein.	0.514
POLR2L	ROMO1	ENSECAP00000045199	ENSECAP00000010117	RNA polymerase II subunit L.	Reactive oxygen species modulator 1.	0.716
POLR2L-2	EIF1B	ENSECAP00000000800	ENSECAP00000004015	RNA polymerase II subunit L.	Eukaryotic translation initiation factor 1B.	0.722
POLR2L-2	POLR2L	ENSECAP00000000800	ENSECAP00000045199	RNA polymerase II subunit L.	RNA polymerase II subunit L.	0.902
POLR2L-2	PPP1R2	ENSECAP00000000800	ENSECAP00000015718	RNA polymerase II subunit L.	Uncharacterized protein.	0.636
POLR2L-2	PTMS	ENSECAP00000000800	ENSECAP00000052954	RNA polymerase II subunit L.	Uncharacterized protein.	0.514
POLR2L-2	ROMO1	ENSECAP00000000800	ENSECAP00000010117	RNA polymerase II subunit L.	Reactive oxygen species modulator 1.	0.729
PPP1R2	EIF1B	ENSECAP00000015718	ENSECAP00000004015	Uncharacterized protein.	Eukaryotic translation initiation factor 1B.	0.523