STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM238LTransmembrane protein 238 like. (81 aa)    
Predicted Functional Partners:
CATSPER1
Cation channel sperm associated 1.
    
 0.695
CATSPERD
Cation channel sperm associated auxiliary subunit delta.
   
 0.646
CATSPERB
Cation channel sperm associated auxiliary subunit beta.
    
 0.607
TMEM53
Transmembrane protein 53.
      
 0.587
TMEM223
Transmembrane protein 223.
      
 0.577
CATSPER3
Cation channel sperm associated 3.
    
 0.561
TMEM147
Transmembrane protein 147.
    
 
 0.501
TMEM154
Transmembrane protein 154.
      
 0.477
TMEM38A
Transmembrane protein 38A.
    
 
 0.472
CACNA1I
Calcium voltage-gated channel subunit alpha1 I.
    
 0.417
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.