STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM42RNA binding motif protein 42. (474 aa)    
Predicted Functional Partners:
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
   
 0.951
USP39
Ubiquitin specific peptidase 39.
    
  0.892
SNRNP27
Small nuclear ribonucleoprotein U4/U6.U5 subunit 27.
    
  0.891
HAUS3
HAUS augmin like complex subunit 3.
   
 0.877
HAUS1
HAUS augmin-like complex subunit 1-like protein.
   
 0.858
HAUS6
HAUS augmin like complex subunit 6.
   
 0.857
HAUS8
HAUS augmin like complex subunit 8.
    
 0.856
PRPF31
Pre-mRNA processing factor 31.
   
 0.847
DTD2
D-aminoacyl-tRNA deacylase 2.
   
  
 0.843
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
    
 0.843
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.