STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF142Zinc finger protein 142. (1853 aa)    
Predicted Functional Partners:
RUFY4
RUN and FYVE domain containing 4.
      
 0.724
STK36
Serine/threonine kinase 36.
   
 0.711
TTLL7
Tubulin tyrosine ligase like 7.
      
 0.625
ZYG11A
Zyg-11 family member A, cell cycle regulator.
    
 
 0.602
POLR3C
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.593
TMBIM1
Transmembrane BAX inhibitor motif containing 1; Belongs to the BI1 family.
   
  
 0.570
TEX13A
Testis expressed 13A.
      
 0.563
LRRC3
Leucine rich repeat containing 3.
   
 0.524
SETD3
Protein-histidine N-methyltransferase.
   
 0.522
TTL
Tubulin tyrosine ligase.
   
  
 0.492
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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