STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM23RNA binding motif protein 23. (453 aa)    
Predicted Functional Partners:
SON
SON DNA binding protein.
   
 0.860
RBM25
RNA binding motif protein 25.
   
 0.819
CDC5L
Cell division cycle 5 like.
   
 
 0.799
SRSF11
Serine and arginine rich splicing factor 11.
   
 
0.794
DCLK3
Doublecortin like kinase 3.
      
 0.770
CPSF7
Cleavage and polyadenylation specific factor 7.
   
 
 0.767
DDX5
DEAD-box helicase 5; Belongs to the DEAD box helicase family.
   
 0.761
DCAF15
DDB1 and CUL4 associated factor 15.
    
 
 0.752
MEGF8
Multiple EGF like domains 8.
      
 0.740
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
0.739
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.