STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC38A1Solute carrier family 38 member 1. (500 aa)    
Predicted Functional Partners:
SLC38A2
Solute carrier family 38 member 2.
  
 
0.906
SLC1A7
Amino acid transporter.
    
 
 0.732
SLC38A9
Solute carrier family 38 member 9.
   
  
 0.722
SLC1A1
Amino acid transporter.
    
 
 0.709
SLC1A3
Solute carrier family 1 member 3.
    
 
 0.695
CISD1
ZnF_CDGSH domain-containing protein.
      
 0.675
ANO6
Anoctamin.
      
 0.625
PROM2
Prominin 2.
      
 0.621
SLC7A5
Solute carrier family 7 member 5.
   
 
 0.609
SLC2A1
Solute carrier family 2 member 1; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
   
  
 0.572
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.