STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THSD4Thrombospondin type 1 domain containing 4. (1019 aa)    
Predicted Functional Partners:
TMEM266
Transmembrane protein 266.
   
  
 0.664
TEKT1
Tektin 1.
      
 0.632
AMZ2
Archaelysin family metallopeptidase 2.
      
 0.620
PKDCC
Protein kinase domain containing, cytoplasmic.
    
 
 0.583
ZBTB7C
Zinc finger and BTB domain containing 7C.
    
 
 0.551
ADAM28
ADAM metallopeptidase domain 28.
    
 
 0.537
BCL2L11
BCL2 like 11.
      
 0.537
FBN1
Fibrillin 1.
   
 0.513
MATN4
Matrilin 4.
    
 0.510
SLC34A1
Solute carrier family 34 member 1.
   
 
 0.504
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.