STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF296Zinc finger protein 296. (544 aa)    
Predicted Functional Partners:
CCDC59
Coiled-coil domain containing 59.
      
 0.559
RHOBTB1
Rho related BTB domain containing 1.
    
 0.500
ENSECAP00000042803
Homeobox domain-containing protein.
   
 
 0.497
NR0B1
Nuclear receptor subfamily 0 group B member 1.
    
 0.496
ZFP36L1
ZFP36 ring finger protein like 1.
   
 
 0.496
CCDC85B
Coiled-coil domain containing 85B.
      
 0.480
DIPK1A
Divergent protein kinase domain 1A.
   
  
 0.480
CWC15
CWC15 spliceosome associated protein homolog.
      
 0.479
B3GNT8
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8.
    
 
 0.478
CPNE9
Copine family member 9.
   
  
 0.477
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.