STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMUB2Transmembrane and ubiquitin like domain containing 2. (342 aa)    
Predicted Functional Partners:
RNF185
Ring finger protein 185.
   
 
 0.753
C31H6orf120
Uncharacterized protein.
      
 0.696
ERLIN2
ER lipid raft associated 2.
   
 
 0.670
HERPUD2
HERPUD family member 2.
   
  
 0.651
TMEM259
Transmembrane protein 259.
    
 
 0.621
RNF170
Ring finger protein 170.
   
 
 0.588
RNF5
Ring finger protein 5.
   
 
 0.562
ARMH3
Armadillo like helical domain containing 3.
   
  
 0.541
ZNF329
Zinc finger protein 329.
   
 
 0.502
DNAJC14
J domain-containing protein.
   
  
 0.498
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.