STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TATDN2Uncharacterized protein. (747 aa)    
Predicted Functional Partners:
PDXDC1
Pyridoxal dependent decarboxylase domain containing 1.
   
  
 0.555
PPP1R35
Protein phosphatase 1 regulatory subunit 35.
      
 0.554
SUPV3L1
Suv3 like RNA helicase.
   
  
 0.544
MGAT4B
Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B.
   
  
 0.492
SLCO2A1
Solute carrier organic anion transporter family member.
      
 0.471
GOLT1B
Vesicle transport protein GOT1B-like protein.
  
  
 0.461
YARS1
Tyrosine--tRNA ligase.
  
 
 0.444
F6TV50_HORSE
Mis18 domain-containing protein.
      
 0.440
OIP5
Mis18 domain-containing protein.
      
 0.440
CCDC174
Coiled-coil domain containing 174.
 
 
  
 0.427
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.