STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDE1CPhosphodiesterase. (769 aa)    
Predicted Functional Partners:
CALML5
Calmodulin like 5.
    
 0.961
PDE1A
Phosphodiesterase.
  
0.950
CALML3
Calmodulin like 3; Belongs to the calmodulin family.
   
 0.948
CALM1
Uncharacterized protein; Belongs to the calmodulin family.
    
 0.947
GNB3
G protein subunit beta 3.
     
 0.943
CALML4
Calmodulin like 4.
    
 0.930
ENPP3
Ectonucleotide pyrophosphatase/phosphodiesterase 3.
     
 0.913
ENPP1
Ectonucleotide pyrophosphatase/phosphodiesterase 1.
     
 0.913
ENTPD1
Ectonucleoside triphosphate diphosphohydrolase 1; Belongs to the GDA1/CD39 NTPase family.
     
 0.909
ENTPD3
Ectonucleoside triphosphate diphosphohydrolase 3; Belongs to the GDA1/CD39 NTPase family.
     
 0.909
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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