STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1D297Amine oxidase. (433 aa)    
Predicted Functional Partners:
A0A2V1DM07
Tryptophan synthase.
     
 0.800
A0A2V1E359
Uncharacterized protein.
    
 0.754
A0A2V1E4B9
PLP-dependent transferase.
    
 0.699
A0A2V1DQC4
WD40 repeat-like protein.
    
 0.685
A0A2V1DC46
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.684
A0A2V1DL00
Uncharacterized protein.
   
 0.682
A0A2V1D5I1
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.672
A0A2V1E7W3
Hist_deacetyl domain-containing protein.
    
 0.672
A0A2V1E9W2
Histone H2B; Belongs to the histone H2B family.
    
  0.672
A0A2V1D2H2
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.650
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.