STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1D4E5ATP-dependent RNA helicase fal1; Belongs to the DEAD box helicase family. (399 aa)    
Predicted Functional Partners:
A0A2V1D8R9
RNA-binding domain-containing protein.
   
 0.998
A0A2V1EE71
Mago nashi protein.
   
 0.998
A0A2V1DAA6
RNA-binding domain-containing protein.
   
 0.997
A0A2V1DIX1
MIF4G-domain-containing protein.
    
 0.997
A0A2V1DL69
RRM domain-containing protein.
   
 0.989
A0A2V1DB29
Uncharacterized protein.
   
 0.983
A0A2V1E9Q0
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.982
A0A2V1DZQ6
WD40 repeat-like protein.
    
 0.977
A0A2V1DEF2
MI domain-containing protein.
   
 
 0.971
A0A2V1DK90
Uncharacterized protein.
    
 0.971
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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