STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1D907Uncharacterized protein. (195 aa)    
Predicted Functional Partners:
A0A2V1D203
EEF1-gamma domain-containing protein.
   
 0.999
A0A2V1DZ44
Glutathione S-transferase; Belongs to the GST superfamily.
   
 0.999
A0A2V1EA86
Elongation factor 1 beta subunit; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.988
A0A2V1D393
40S ribosomal protein-like protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 0.972
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.966
A0A2V1DY00
Eukaryotic peptide chain release factor subunit 1.
   
 0.959
A0A2V1DNR6
ARM repeat-containing protein.
   
 
 0.947
A0A2V1D4Z8
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.940
A0A2V1DG08
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.931
A0A2V1E0R2
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 0.926
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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