A0A2V1DAM6 protein (Periconia macrospinosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2V1DAM6

Acyl-CoA dehydrogenase NM domain-like protein. (448 aa)

Predicted Functional Partners:

A0A2V1DNX6

0.929

A0A2V1DEP2

0.874

A0A2V1DMY6

0.874

A0A2V1DN12

0.874

A0A2V1E736

0.874

A0A2V1ED78

0.874

A0A2V1DV83

0.869

A0A2V1EGG2

0.868

A0A2V1D833

0.867

A0A2V1DEY0

0.865

Your Current Organism:

Periconia macrospinosa

NCBI taxonomy Id: 97972
Other names: P. macrospinosa

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2V1D833	A0A2V1DAM6	Uncharacterized protein.	Acyl-CoA dehydrogenase NM domain-like protein.	0.867
A0A2V1D833	A0A2V1DEY0	Uncharacterized protein.	Uncharacterized protein.	0.976
A0A2V1D833	A0A2V1DV83	Uncharacterized protein.	Uncharacterized protein.	0.977
A0A2V1D833	A0A2V1EGG2	Uncharacterized protein.	Uncharacterized protein.	0.967
A0A2V1DAM6	A0A2V1D833	Acyl-CoA dehydrogenase NM domain-like protein.	Uncharacterized protein.	0.867
A0A2V1DAM6	A0A2V1DEP2	Acyl-CoA dehydrogenase NM domain-like protein.	Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.874
A0A2V1DAM6	A0A2V1DEY0	Acyl-CoA dehydrogenase NM domain-like protein.	Uncharacterized protein.	0.865
A0A2V1DAM6	A0A2V1DMY6	Acyl-CoA dehydrogenase NM domain-like protein.	Uncharacterized protein.	0.874
A0A2V1DAM6	A0A2V1DN12	Acyl-CoA dehydrogenase NM domain-like protein.	Uncharacterized protein.	0.874
A0A2V1DAM6	A0A2V1DNX6	Acyl-CoA dehydrogenase NM domain-like protein.	Electron transfer flavo protein-like protein subunit alpha.	0.929
A0A2V1DAM6	A0A2V1DV83	Acyl-CoA dehydrogenase NM domain-like protein.	Uncharacterized protein.	0.869
A0A2V1DAM6	A0A2V1E736	Acyl-CoA dehydrogenase NM domain-like protein.	Electron transfer flavo protein subunit beta.	0.874
A0A2V1DAM6	A0A2V1ED78	Acyl-CoA dehydrogenase NM domain-like protein.	Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.874
A0A2V1DAM6	A0A2V1EGG2	Acyl-CoA dehydrogenase NM domain-like protein.	Uncharacterized protein.	0.868
A0A2V1DEP2	A0A2V1DAM6	Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl-CoA dehydrogenase NM domain-like protein.	0.874
A0A2V1DEP2	A0A2V1DMY6	Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.922
A0A2V1DEP2	A0A2V1DN12	Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.923
A0A2V1DEP2	A0A2V1DNX6	Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.	Electron transfer flavo protein-like protein subunit alpha.	0.648
A0A2V1DEP2	A0A2V1E736	Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.	Electron transfer flavo protein subunit beta.	0.518
A0A2V1DEP2	A0A2V1ED78	Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.	Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.921