STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1DAT3WD40 repeat-like protein. (583 aa)    
Predicted Functional Partners:
A0A2V1DM15
Ubiquitin carboxyl-terminal hydrolase.
    
 0.999
DM02DRAFT_3177
WD40 repeat-like protein.
    
 0.998
A0A2V1DSP7
Uncharacterized protein.
    
 0.908
A0A2V1DAJ9
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
 
  
  0.862
A0A2V1D576
Mitotic spindle checkpoint component mad2.
   
 0.860
A0A2V1D4U9
TFIID-31kDa-domain-containing protein.
    
 0.851
A0A2V1DE94
Uncharacterized protein.
   
 0.851
A0A2V1DT91
TAF-domain-containing protein.
    
 0.851
A0A2V1DUK6
TFIID_20kDa domain-containing protein.
    
 0.851
A0A2V1EFZ0
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.851
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.