STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1DBT4Glycoside hydrolase family 71 protein. (407 aa)    
Predicted Functional Partners:
A0A2V1D477
CENP-T_C domain-containing protein.
   
 0.784
A0A2V1DNE0
Rho1 guanine nucleotide exchange factor 1.
    
 0.665
A0A2V1EFN7
NPL4-domain-containing protein.
    
 0.661
A0A2V1E078
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.646
A0A2V1D5H4
dUTP diphosphatase.
   
 0.624
A0A2V1D943
Uncharacterized protein.
   
 0.624
A0A2V1DPE0
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
  0.620
A0A2V1DJY4
DNA repair protein-like protein RAD1.
    
 0.608
A0A2V1DYU8
Replication protein-like protein A 32 kDa subunit.
    
  0.588
A0A2V1DQ67
Ribosomal protein L1.
    
  0.585
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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