STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1DBW6Uncharacterized protein. (308 aa)    
Predicted Functional Partners:
A0A2V1E2H0
POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.999
A0A2V1E3L2
Putative 60S ribosomal protein L5.
    
 
 0.925
A0A2V1E5W7
Uncharacterized protein.
    
 0.921
A0A2V1E4B2
Ribosomal protein L14b/L23e; Belongs to the universal ribosomal protein uL14 family.
    
 
 0.912
A0A2V1DHF9
Ribosomal protein L13.
    
   0.911
A0A2V1DKH1
60S ribosomal protein-like protein L3; Belongs to the universal ribosomal protein uL3 family.
    
   0.911
A0A2V1DKM9
60S ribosomal protein-like protein L35.
    
   0.911
A0A2V1DLJ4
L30e-like protein.
    
   0.911
A0A2V1E475
Putative 60S ribosomal protein L22.
    
   0.911
A0A2V1E9B2
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
    
   0.911
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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