STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1DGD9P-loop containing nucleoside triphosphate hydrolase protein. (702 aa)    
Predicted Functional Partners:
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.937
A0A2V1EGW4
Sas10/Utp3 family protein.
   
  0.910
A0A2V1DMM1
RNA-binding domain-containing protein.
   
   0.900
A0A2V1E8Y5
U3 small nucleolar RNA-associated protein 22.
   
  0.898
A0A2V1DYM2
Rsa3 domain-containing protein.
   
 
 0.889
A0A2V1E3M1
Utp14-domain-containing protein.
   
 0.885
A0A2V1DL75
Urb2 domain-containing protein.
   
 
 0.877
A0A2V1DA54
Uncharacterized protein.
   
 
 0.874
A0A2V1EDX5
P-loop containing nucleoside triphosphate hydrolase protein.
  
0.869
A0A2V1D9S8
DEAD-domain-containing protein.
  
 
0.866
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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