STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1DH32Ent-kaurene synthase. (952 aa)    
Predicted Functional Partners:
A0A2V1DM07
Tryptophan synthase.
    
 0.847
A0A2V1EE35
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
  
 0.833
A0A2V1DI39
Lycopene beta-cyclase.
  
 0.788
A0A2V1DWE4
Farnesyl-diphosphate farnesyltransferase.
  
 0.788
A0A2V1D6Q5
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
 
  0.784
A0A2V1D6D9
Isopentenyl-diphosphate delta isomeras-like protein 1.
  
 
 0.761
A0A2V1DCA1
L-lactate dehydrogenase.
   
 
 0.748
A0A2V1DKN7
Uncharacterized protein.
   
 
 0.748
A0A2V1DR15
FMN-dependent alpha-hydroxy acid dehydrogenase.
   
 
 0.748
A0A2V1DVV4
Uncharacterized protein.
   
 
 0.748
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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