Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A2V1D8I8 | A0A2V1DJ57 | Nitrite reductase. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.955 |
A0A2V1D8I8 | A0A2V1DKP2 | Nitrite reductase. | Nitrate/nitrite transporter. | 0.914 |
A0A2V1D8I8 | A0A2V1DMW1 | Nitrite reductase. | Ferredoxin. | 0.721 |
A0A2V1D8I8 | A0A2V1E4S3 | Nitrite reductase. | Nitrate/nitrite transporter. | 0.928 |
A0A2V1D8I8 | A0A2V1E7P1 | Nitrite reductase. | Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. | 0.723 |
A0A2V1D8I8 | A0A2V1ECL9 | Nitrite reductase. | Uncharacterized protein. | 0.721 |
A0A2V1DJ57 | A0A2V1D8I8 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Nitrite reductase. | 0.955 |
A0A2V1DJ57 | A0A2V1DKP2 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Nitrate/nitrite transporter. | 0.956 |
A0A2V1DJ57 | A0A2V1DMW1 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Ferredoxin. | 0.943 |
A0A2V1DJ57 | A0A2V1E4S3 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Nitrate/nitrite transporter. | 0.960 |
A0A2V1DJ57 | A0A2V1E5C1 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | FMN-linked oxidoreductase. | 0.948 |
A0A2V1DJ57 | A0A2V1E626 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Uncharacterized protein. | 0.953 |
A0A2V1DJ57 | A0A2V1E7P1 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. | 0.947 |
A0A2V1DJ57 | A0A2V1E8W1 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.953 |
A0A2V1DJ57 | A0A2V1ECL9 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Uncharacterized protein. | 0.943 |
A0A2V1DJ57 | A0A2V1EGP2 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Dihydroorotate dehydrogenase (fumarate); Catalyzes the conversion of dihydroorotate to orotate with fumarate as the electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily. | 0.948 |
A0A2V1DKP2 | A0A2V1D8I8 | Nitrate/nitrite transporter. | Nitrite reductase. | 0.914 |
A0A2V1DKP2 | A0A2V1DJ57 | Nitrate/nitrite transporter. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.956 |
A0A2V1DKP2 | A0A2V1DMW1 | Nitrate/nitrite transporter. | Ferredoxin. | 0.673 |
A0A2V1DKP2 | A0A2V1E7P1 | Nitrate/nitrite transporter. | Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. | 0.855 |
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