STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1DK75Carotenoid oxygenase. (500 aa)    
Predicted Functional Partners:
A0A2V1DI39
Lycopene beta-cyclase.
     
 0.683
A0A2V1ECW8
DUF1776-domain-containing protein.
     
 0.642
A0A2V1DA89
DAGAT-domain-containing protein.
     
 0.616
A0A2V1DWE4
Farnesyl-diphosphate farnesyltransferase.
     
 0.580
A0A2V1D1Q7
Uncharacterized protein.
     
 0.574
A0A2V1E7S3
Xanthine dehydrogenase.
     
 0.574
A0A2V1DC99
Uncharacterized protein.
     
 0.545
A0A2V1D2H2
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.530
A0A2V1E0Z9
Uncharacterized protein.
     
 0.530
A0A2V1E4M7
ALDH-like protein.
     
 0.530
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.