STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1DKP5SH3 domain-containing protein. (471 aa)    
Predicted Functional Partners:
A0A2V1EA86
Elongation factor 1 beta subunit; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.761
A0A2V1D907
Uncharacterized protein.
   
 0.652
A0A2V1E0C8
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.652
A0A2V1EC32
RNA polymerase II subunit 3-like protein.
   
 
 0.628
A0A2V1EDY2
DNA-directed RNA polymeras-like proteines I and III subunit RPAC1.
   
 
 0.628
A0A2V1E5T4
Uncharacterized protein.
   
 
 0.617
A0A2V1ECR7
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.592
A0A2V1DQ80
tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
 0.557
A0A2V1D203
EEF1-gamma domain-containing protein.
   
 0.547
A0A2V1DZ44
Glutathione S-transferase; Belongs to the GST superfamily.
   
 0.547
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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