STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1DMP8HTH CENPB-type domain-containing protein. (140 aa)    
Predicted Functional Partners:
A0A2V1DWK6
Sulfur metabolism negative regulator SconC; Belongs to the SKP1 family.
    
 
 0.698
A0A2V1D5S1
Ubiquitin carrier protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.591
A0A2V1D6A4
Mob1/phocein.
    
 
 0.591
A0A2V1DPM9
Uncharacterized protein.
    
 
 0.586
A0A2V1DSA9
Zn(2)-C6 fungal-type domain-containing protein.
    
 
 0.586
A0A2V1DWL0
Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.
    
   0.586
A0A2V1E3T5
Zn(2)-C6 fungal-type domain-containing protein.
    
 
 0.586
A0A2V1EAP1
Isy1-like splicing factor.
    
   0.586
A0A2V1DBB8
Uncharacterized protein.
    
 
 0.582
A0A2V1E0E7
Uncharacterized protein.
    
 
 0.582
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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