A0A2V1DPL9 protein (Periconia macrospinosa) - STRING interaction network

Nodes:

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second shell of interactors

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Score

A0A2V1DPL9

Quinone oxidoreductase putative. (338 aa)

Predicted Functional Partners:

A0A2V1DPE0

0.758

A0A2V1DM73

0.634

A0A2V1DRY5

0.634

A0A2V1DJ57

0.548

A0A2V1E663

0.497

A0A2V1DLI5

0.491

A0A2V1DC00

0.470

A0A2V1DI61

0.470

A0A2V1DTJ9

0.470

A0A2V1DWU3

0.470

Your Current Organism:

Periconia macrospinosa

NCBI taxonomy Id: 97972
Other names: P. macrospinosa

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2V1DC00	A0A2V1DI61	Phosphotransferase.	Phosphotransferase.	0.623
A0A2V1DC00	A0A2V1DLI5	Phosphotransferase.	Glycoside hydrolase family 5 protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.	0.792
A0A2V1DC00	A0A2V1DPL9	Phosphotransferase.	Quinone oxidoreductase putative.	0.470
A0A2V1DC00	A0A2V1DTJ9	Phosphotransferase.	Phosphotransferase.	0.793
A0A2V1DC00	A0A2V1E663	Phosphotransferase.	Uncharacterized protein.	0.925
A0A2V1DI61	A0A2V1DC00	Phosphotransferase.	Phosphotransferase.	0.623
A0A2V1DI61	A0A2V1DLI5	Phosphotransferase.	Glycoside hydrolase family 5 protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.	0.784
A0A2V1DI61	A0A2V1DPL9	Phosphotransferase.	Quinone oxidoreductase putative.	0.470
A0A2V1DI61	A0A2V1DTJ9	Phosphotransferase.	Phosphotransferase.	0.768
A0A2V1DI61	A0A2V1E663	Phosphotransferase.	Uncharacterized protein.	0.915
A0A2V1DJ57	A0A2V1DLI5	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Glycoside hydrolase family 5 protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.	0.773
A0A2V1DJ57	A0A2V1DM73	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Putative sulfite oxidase.	0.898
A0A2V1DJ57	A0A2V1DPL9	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Quinone oxidoreductase putative.	0.548
A0A2V1DJ57	A0A2V1DRY5	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Molybdopterin binding oxidoreductase.	0.898
A0A2V1DLI5	A0A2V1DC00	Glycoside hydrolase family 5 protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.	Phosphotransferase.	0.792
A0A2V1DLI5	A0A2V1DI61	Glycoside hydrolase family 5 protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.	Phosphotransferase.	0.784
A0A2V1DLI5	A0A2V1DJ57	Glycoside hydrolase family 5 protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.773
A0A2V1DLI5	A0A2V1DPL9	Glycoside hydrolase family 5 protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.	Quinone oxidoreductase putative.	0.491
A0A2V1DLI5	A0A2V1DTJ9	Glycoside hydrolase family 5 protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.	Phosphotransferase.	0.792
A0A2V1DLI5	A0A2V1DWU3	Glycoside hydrolase family 5 protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.	Phosphotransferase.	0.668

page 1 of 3

Network Stats

number of nodes:

3

number of edges:

3

average node degree:

2

avg. local clustering coefficient:

1

expected number of edges:

2

PPI enrichment p-value:

0.211

your network does not have significantly more
interactions than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0016573

Histone acetylation

4 of 30

2.14

2.62

5.37e-06

GO:0045893

Positive regulation of transcription, DNA-templated

5 of 150

1.54

1.76

3.13e-05

GO:0006366

Transcription by RNA polymerase II

4 of 83

1.7

1.75

0.00011

GO:0006367

Transcription initiation from RNA polymerase II promoter

3 of 35

1.95

1.64

0.00050

GO:0006355

Regulation of transcription, DNA-templated

9 of 582

1.21

1.55

4.39e-07

(more ...)

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0003712

Transcription coregulator activity

7 of 64

2.06

4.29

1.32e-10

GO:0003713

Transcription coactivator activity

4 of 19

2.34

2.92

2.11e-06

GO:0046982

Protein heterodimerization activity

4 of 27

2.19

2.64

5.61e-06

GO:0017025

TBP-class protein binding

2 of 11

2.28

0.96

0.0170

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0000124

SAGA complex

10 of 17

2.79

11.49

7.14e-24

GO:0005654

Nucleoplasm

11 of 201

1.76

4.81

7.92e-18

GO:1990234

Transferase complex

11 of 315

1.56

3.56

8.65e-16

GO:0140535

Intracellular protein-containing complex

11 of 348

1.52

3.32

2.26e-15

GO:0046695

SLIK (SAGA-like) complex

3 of 5

2.8

3.13

1.67e-06

(more ...)

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:4491

SAGA complex

8 of 11

2.88

9.08

3.10e-18

CL:4495

SAGA complex

4 of 6

2.84

4.22

1.46e-08

CL:6970

Transcription factor TFIID complex

3 of 9

2.54

2.51

2.02e-05

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map03022

Basal transcription factors

3 of 57

1.74

1.2

0.0034

Reactome Pathways

pathway

description

count in network

strength

signal

false discovery rate

MAP-5688426

Deubiquitination

4 of 94

1.65

1.3

0.0015

MAP-76042

RNA Polymerase II Transcription Initiation And Promoter Clearance

3 of 44

1.85

1.24

0.0033

MAP-75953

RNA Polymerase II Transcription Initiation

3 of 44

1.85

1.24

0.0033

MAP-73779

RNA Polymerase II Transcription Pre-Initiation And Promoter Opening

3 of 44

1.85

1.24

0.0033

MAP-73776

RNA Polymerase II Promoter Escape

3 of 44

1.85

1.24

0.0033

(more ...)

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0070461

SAGA-type complex

8 of 17

2.69

8.35

2.39e-17

GOCC:0000124

SAGA complex

7 of 15

2.69

7.4

2.69e-15

GOCC:0005654

Nucleoplasm

11 of 252

1.66

4.07

3.75e-16

GOCC:1990234

Transferase complex

11 of 374

1.49

3.13

9.71e-15

GOCC:0016591

RNA polymerase II, holoenzyme

3 of 39

1.9

1.66

0.00040

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR009072

Histone-fold

4 of 21

2.3

2.47

1.64e-05

Enrichment display settings

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