STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1DU04Alpha/beta-hydrolase; Belongs to the type-B carboxylesterase/lipase family. (707 aa)    
Predicted Functional Partners:
A0A2V1CYY7
Glycerophosphoryl diester phosphodiesterase.
    
  0.779
A0A2V1E784
GDPD-domain-containing protein.
    
  0.779
A0A2V1DJ57
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.778
A0A2V1D626
PLC-like phosphodiesterase.
    
  0.741
A0A2V1DLX7
DRIM domain-containing protein.
   
  0.683
A0A2V1D2Z6
WD40 repeat-like protein.
    
  0.640
A0A2V1D736
Nep1-domain-containing protein.
    
  0.640
A0A2V1D988
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
    
  0.640
A0A2V1DEP3
rRNA-processing protein-like protein FCF1.
    
  0.640
A0A2V1DG08
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.640
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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