STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1DUI2Uncharacterized protein. (449 aa)    
Predicted Functional Partners:
A0A2V1DUK6
TFIID_20kDa domain-containing protein.
    
 0.993
A0A2V1E760
SCA7-domain-containing protein.
    
 0.993
A0A2V1DT91
TAF-domain-containing protein.
    
 0.992
A0A2V1ECS7
Bromo domain-containing protein.
   
 0.991
A0A2V1D4U9
TFIID-31kDa-domain-containing protein.
    
 0.990
A0A2V1EBM7
Transcription initiation factor TFIID subunit 5.
   
 0.990
A0A2V1EBJ4
TFIID-18kDa-domain-containing protein.
    
 0.989
A0A2V1EFZ0
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.985
A0A2V1D109
Uncharacterized protein.
    
 0.979
A0A2V1E5Q5
SGF29 C-terminal domain-containing protein.
    
 0.975
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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