STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1DUV7TGc domain-containing protein. (649 aa)    
Predicted Functional Partners:
A0A2V1DZB5
WD40 repeat-like protein.
   
 0.637
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.631
A0A2V1E632
rRNA processing protein Ipi1.
   
 0.604
A0A2V1DSM9
Uncharacterized protein.
 
      0.582
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.562
A0A2V1DTD1
Small GTPase.
 
  
  0.561
A0A2V1DKM2
CLP1_P domain-containing protein.
   
  0.525
A0A2V1DUQ2
Nucleolar GTP-binding protein 2.
   
  0.515
A0A2V1E199
CRIB domain-containing protein.
    
 0.514
A0A2V1E1V6
Alpha-actin-like proteinin.
    
 0.514
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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