STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1DUZ6Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (414 aa)    
Predicted Functional Partners:
A0A2V1DRE5
Tr-type G domain-containing protein.
   
 
 0.987
A0A2V1DND5
WD40 repeat-like protein.
    
 
 0.955
A0A2V1DNP3
Hemin import ATP-binding protein hmuV.
  
 
 0.939
A0A2V1D4Z8
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.933
A0A2V1DG08
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 
 0.929
A0A2V1E619
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 
 0.928
A0A2V1DIE6
Ribosomal protein S1.
    
 
 0.922
A0A2V1D8T3
Ribosomal protein S17e.
    
 
 0.918
A0A2V1DQY4
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.917
A0A2V1E4I5
L30e-like protein.
    
 
 0.910
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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