STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1DV49Uncharacterized protein. (682 aa)    
Predicted Functional Partners:
A0A2V1D2Z0
Kinase-like protein.
    
 0.837
A0A2V1DD69
Kinase-like protein.
    
 0.837
A0A2V1E2B7
Serine/threonine-protein kinase bur1; Belongs to the protein kinase superfamily.
    
 0.837
A0A2V1EAR9
Pkinase-domain-containing protein.
    
 0.837
A0A2V1E8G2
CID domain-containing protein.
   
 
 0.826
A0A2V1DHK1
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 0.790
A0A2V1E206
Uncharacterized protein.
    
 0.790
A0A2V1EG49
Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 0.784
A0A2V1DJ33
Transcription elongation factor S-II.
    
 0.783
A0A2V1E3M2
Serine/threonine-protein kinase crk1; Belongs to the protein kinase superfamily.
     
 0.734
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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