STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1DVI4Uncharacterized protein. (767 aa)    
Predicted Functional Partners:
A0A2V1ECH2
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.650
A0A2V1D9U2
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.649
A0A2V1ED39
Vacuolar protein sorting-associated protein 26B-A.
    
 
 0.649
A0A2V1DA65
Synaptobrevin.
    
 0.634
A0A2V1E7R4
ANTH-domain-containing protein.
    
  0.596
A0A2V1DKT2
Mannose 6-phosphate receptor domain-containing protein.
    
 0.588
A0A2V1E3N2
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.587
A0A2V1EC86
Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A.
    
 0.558
A0A2V1DH75
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
  0.520
A0A2V1E6F1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
  0.512
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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