STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1DVR5Uncharacterized protein. (222 aa)    
Predicted Functional Partners:
A0A2V1DZQ6
WD40 repeat-like protein.
    
 0.982
A0A2V1E8X7
Pre-mRNA-splicing factor SLU7.
   
 0.971
A0A2V1E3M9
DUF1754-domain-containing protein.
    
 0.961
A0A2V1DVT0
SYF2-domain-containing protein.
   
  0.939
A0A2V1E8D3
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.936
A0A2V1DN26
Sde2_N_Ubi domain-containing protein.
    
 0.931
A0A2V1D8A0
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
   0.912
A0A2V1EEB2
Small nuclear ribonucleoprotein G.
    
   0.904
A0A2V1DZ32
U2-associated snRNP A.
    
   0.893
A0A2V1E6K2
Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.
    
   0.892
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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