A0A2V1DX20 protein (Periconia macrospinosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2V1DX20

Uncharacterized protein. (111 aa)

Predicted Functional Partners:

A0A2V1DM07

0.765

A0A2V1E4H8

0.678

A0A2V1EDK5

0.483

A0A2V1E012

0.482

A0A2V1E2R9

0.482

A0A2V1DYA1

0.453

A0A2V1E7R5

0.451

DM02DRAFT_6387

0.450

A0A2V1DB36

0.439

A0A2V1DJK7

0.439

Your Current Organism:

Periconia macrospinosa

NCBI taxonomy Id: 97972
Other names: P. macrospinosa

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2V1DB36	A0A2V1DX20	A0A2V1DB36	A0A2V1DX20	S-adenosyl-L-methionine-dependent methyltransferase.	Uncharacterized protein.	0.439
A0A2V1DJK7	A0A2V1DX20	A0A2V1DJK7	A0A2V1DX20	S-adenosyl-L-methionine-dependent methyltransferase.	Uncharacterized protein.	0.439
A0A2V1DM07	A0A2V1DX20	A0A2V1DM07	A0A2V1DX20	Tryptophan synthase.	Uncharacterized protein.	0.765
A0A2V1DX20	A0A2V1DB36	A0A2V1DX20	A0A2V1DB36	Uncharacterized protein.	S-adenosyl-L-methionine-dependent methyltransferase.	0.439
A0A2V1DX20	A0A2V1DJK7	A0A2V1DX20	A0A2V1DJK7	Uncharacterized protein.	S-adenosyl-L-methionine-dependent methyltransferase.	0.439
A0A2V1DX20	A0A2V1DM07	A0A2V1DX20	A0A2V1DM07	Uncharacterized protein.	Tryptophan synthase.	0.765
A0A2V1DX20	A0A2V1DYA1	A0A2V1DX20	A0A2V1DYA1	Uncharacterized protein.	Charged multivesicular body protein-like protein 6.	0.453
A0A2V1DX20	A0A2V1E012	A0A2V1DX20	A0A2V1E012	Uncharacterized protein.	DUF605-domain-containing protein.	0.482
A0A2V1DX20	A0A2V1E2R9	A0A2V1DX20	A0A2V1E2R9	Uncharacterized protein.	Uncharacterized protein.	0.482
A0A2V1DX20	A0A2V1E4H8	A0A2V1DX20	A0A2V1E4H8	Uncharacterized protein.	TOM13-domain-containing protein.	0.678
A0A2V1DX20	A0A2V1E7R5	A0A2V1DX20	A0A2V1E7R5	Uncharacterized protein.	Snf7-domain-containing protein.	0.451
A0A2V1DX20	A0A2V1EDK5	A0A2V1DX20	A0A2V1EDK5	Uncharacterized protein.	DUF292-domain-containing protein.	0.483
A0A2V1DX20	DM02DRAFT_6387	A0A2V1DX20	A0A2V1EDG0	Uncharacterized protein.	SNF7 family protein-like protein.	0.450
A0A2V1DYA1	A0A2V1DX20	A0A2V1DYA1	A0A2V1DX20	Charged multivesicular body protein-like protein 6.	Uncharacterized protein.	0.453
A0A2V1DYA1	A0A2V1E012	A0A2V1DYA1	A0A2V1E012	Charged multivesicular body protein-like protein 6.	DUF605-domain-containing protein.	0.813
A0A2V1DYA1	A0A2V1E2R9	A0A2V1DYA1	A0A2V1E2R9	Charged multivesicular body protein-like protein 6.	Uncharacterized protein.	0.934
A0A2V1DYA1	A0A2V1E7R5	A0A2V1DYA1	A0A2V1E7R5	Charged multivesicular body protein-like protein 6.	Snf7-domain-containing protein.	0.998
A0A2V1DYA1	A0A2V1EDK5	A0A2V1DYA1	A0A2V1EDK5	Charged multivesicular body protein-like protein 6.	DUF292-domain-containing protein.	0.954
A0A2V1DYA1	DM02DRAFT_6387	A0A2V1DYA1	A0A2V1EDG0	Charged multivesicular body protein-like protein 6.	SNF7 family protein-like protein.	0.997
A0A2V1E012	A0A2V1DX20	A0A2V1E012	A0A2V1DX20	DUF605-domain-containing protein.	Uncharacterized protein.	0.482