STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1DY03RNA-binding domain-containing protein. (442 aa)    
Predicted Functional Partners:
A0A2V1DZN4
Ribosome biogenesis protein-like protein RPF2.
   
   0.918
A0A2V1DDK1
Uncharacterized protein.
  
 
 0.911
A0A2V1DX80
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.888
A0A2V1DFK4
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
    0.875
A0A2V1D114
Nop-domain-containing protein.
   
 
 0.862
A0A2V1D9L6
Ribosome assembly protein-like protein Noc2.
   
 
 0.858
A0A2V1E3R1
Nop domain-containing protein.
   
 
 0.856
A0A2V1E0V1
NOL1/NOP2/sun family putative RNA met; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.854
A0A2V1E141
WD40 repeat-like protein.
   
  
 0.852
A0A2V1DCN8
Fibrillarin.
   
 
 0.851
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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