STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1DZE4NUC153 domain-containing protein. (749 aa)    
Predicted Functional Partners:
A0A2V1DXR9
RNA helicase.
   
 
 0.996
A0A2V1DKA1
Uncharacterized protein.
   
 
 0.994
A0A2V1EGW4
Sas10/Utp3 family protein.
   
 
 0.994
A0A2V1E8Y5
U3 small nucleolar RNA-associated protein 22.
   
 
 0.993
A0A2V1DUD3
U3 small nucleolar RNA-associated protein-like protein.
   
 
 0.991
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
  
 
 0.990
A0A2V1DV25
Pre-rRNA-processing protein ESF2.
   
 
 0.980
A0A2V1E9Q0
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.979
A0A2V1DKQ9
Putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
   
 
 0.978
A0A2V1DEF2
MI domain-containing protein.
   
   0.976
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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