STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1DZL5Fumarylacetoacetate hydrolase family protein-like protein. (294 aa)    
Predicted Functional Partners:
A0A2V1D8Z4
3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
  
 
  0.629
A0A2V1DWE5
HgmA-domain-containing protein.
  
 
 0.602
A0A2V1E6J2
Homogentisate 1,2-dioxygenase.
  
 
 0.602
A0A2V1E9F6
Homogentisate 1,2-dioxygenase-like protein.
  
 
 0.602
A0A2V1E602
Fumarate hydratase.
   
 0.543
A0A2V1EB14
Malate synthase; Belongs to the malate synthase family.
    
 0.522
A0A2V1DCY3
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
  0.491
A0A2V1ECV9
PLP-dependent transferase.
   
 
  0.457
A0A2V1CXU0
ALDH-like protein; Belongs to the aldehyde dehydrogenase family.
 
 
  0.437
A0A2V1CYW8
ALDH-like protein.
   
  0.437
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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