STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1E008P-loop containing nucleoside triphosphate hydrolase protein. (1393 aa)    
Predicted Functional Partners:
A0A2V1E2N0
Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.
    
 0.934
A0A2V1DLG8
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.846
A0A2V1E3M1
Utp14-domain-containing protein.
   
 0.844
A0A2V1DW42
Uncharacterized protein.
  
 0.840
A0A2V1DJ89
CBF-domain-containing protein.
   
  0.831
A0A2V1DZQ6
WD40 repeat-like protein.
    
 0.824
A0A2V1E8X7
Pre-mRNA-splicing factor SLU7.
    
 0.800
A0A2V1DK14
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
 
  
  0.799
A0A2V1DUD3
U3 small nucleolar RNA-associated protein-like protein.
   
 0.798
A0A2V1EGW4
Sas10/Utp3 family protein.
   
 0.797
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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