STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1E2N5WLM-domain-containing protein. (335 aa)    
Predicted Functional Partners:
A0A2V1E2W9
Ubiquitin-like protein.
    
 
 0.704
A0A2V1ECJ6
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...]
    
 
 0.574
A0A2V1DVN6
Phospholipase D/nuclease.
    
 
 0.571
A0A2V1E2Q6
Phospholipase D/nuclease.
    
 
 0.571
A0A2V1ECD9
WLM-domain-containing protein.
    
 
 0.541
A0A2V1DZ72
Cysteine proteinase.
    
 
 0.478
A0A2V1E6K8
Creatinase/aminopeptidase.
      
 0.431
A0A2V1D5W3
Uncharacterized protein.
    
 
 0.412
A0A2V1DD65
Uncharacterized protein.
    
 
 0.412
A0A2V1DL12
Uncharacterized protein.
    
 
 0.412
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.