STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1E3N6Cytidine deaminase-like protein. (164 aa)    
Predicted Functional Partners:
A0A2V1DIV2
tRNA modification GTPase mss1 mitochondrial.
   
 
 0.836
A0A2V1D0M9
5-amino-6-uracil reductase-like protein.
    
 0.827
A0A2V1D6G4
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
    
 0.827
A0A2V1DV61
Ribokinase-like protein.
    
 0.820
A0A2V1E3A5
Ribokinase-like protein.
    
 0.820
A0A2V1ECW2
Ribokinase-like protein.
    
 0.820
A0A2V1D8S1
UDP-GlcNAc-1-phosphate transferase.
  
 
  0.805
A0A2V1D8W2
Cytidine deaminase-like protein.
   
 0.802
A0A2V1EB68
Protein methyltransferase.
   
 0.802
A0A2V1DHK6
tRNA pseudouridine synthase D.
  
 
 0.794
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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